Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062530

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062530
Fusion NameHBV-chr5:14014632 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1225/21
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr5
Cytogenetic Bandp15.2
Human Strand
Human Integration Location Typeintergenic
Hg19 Start14014741
Hg19 End14014789
Hg38 Start14014632
Hg38 End14014680
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneDNAH5
Distance2815
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint12076
Virus Breakpoint22189
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-