Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062557

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062557
Fusion NameHBV-GUCY2F integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1225/21
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human ChromosomechrX
Cytogenetic Bandq23
Human Strand
Human Integration Location Typeintronic
Hg19 Start108678078
Hg19 End108678132
Hg38 Start109434849
Hg38 End109434903
Junction Sequence-
Target Gene
Target GeneGUCY2F
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1101
Virus Breakpoint2203
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-