Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062559

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062559
Fusion NameHBV-TSPY2 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1225/21
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human ChromosomechrY
Cytogenetic Bandp11.2
Human Strand
Human Integration Location Typeexonic
Hg19 Start6116707
Hg19 End6116790
Hg38 Start6248666
Hg38 End6248749
Junction Sequence-
Target Gene
Target GeneTSPY2
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint12660
Virus Breakpoint22732
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-