Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062564

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062564
Fusion NameHBV-ENSG00000297892 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1018/24
Sample TypeTumor
Age86
GenderMale
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr16
Cytogenetic Bandq22.2
Human Strand
Human Integration Location Typeintronic
Hg19 Start71266053
Hg19 End71266119
Hg38 Start71232150
Hg38 End71232216
Junction Sequence-
Target Gene
Target GeneENSG00000297892
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11696
Virus Breakpoint21800
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-