Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062567

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062567
Fusion NameHBV-PRELID2 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1018/24
Sample TypeTumor
Age86
GenderMale
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr5
Cytogenetic Bandq32
Human Strand
Human Integration Location Typeintronic
Hg19 Start145039537
Hg19 End145039622
Hg38 Start145659974
Hg38 End145660059
Junction Sequence-
Target Gene
Target GenePRELID2
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11822
Virus Breakpoint21879
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-