Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062569

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062569
Fusion NameHBV-chr7:44926942 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1018/24
Sample TypeTumor
Age86
GenderMale
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr7
Cytogenetic Bandp13
Human Strand
Human Integration Location Typeintergenic
Hg19 Start44966541
Hg19 End44966652
Hg38 Start44926942
Hg38 End44927053
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneENSG00000230160
Distance6614
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11449
Virus Breakpoint21525
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-