Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062617

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062617
Fusion NameHBV-RAD51B integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1018/32
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr14
Cytogenetic Bandq24.1
Human Strand
Human Integration Location Typeintronic
Hg19 Start68346160
Hg19 End68346205
Hg38 Start67879443
Hg38 End67879488
Junction Sequence-
Target Gene
Target GeneRAD51B
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1221
Virus Breakpoint2293
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-