Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062709

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062709
Fusion NameHBV-ENSG00000306071 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1018/32
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr5
Cytogenetic Bandq33.2
Human Strand
Human Integration Location Typeexonic
Hg19 Start153865316
Hg19 End153865398
Hg38 Start154485756
Hg38 End154485838
Junction Sequence-
Target Gene
Target GeneENSG00000306071, ENSG00000254293
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11739
Virus Breakpoint21811
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-