Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062757

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062757
Fusion NameHBV-LINC02668 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-0305/1
Sample TypeTumor
Age47
GenderFemale
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr10
Cytogenetic Bandp15.2
Human Strand
Human Integration Location Typeintronic
Hg19 Start3316894
Hg19 End3316957
Hg38 Start3274702
Hg38 End3274765
Junction Sequence-
Target Gene
Target GeneLINC02668
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11823
Virus Breakpoint21907
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-