Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062758

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062758
Fusion NameHBV-ENSG00000310312 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-0305/1
Sample TypeTumor
Age47
GenderFemale
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr12
Cytogenetic Bandq14.1
Human Strand
Human Integration Location Typeintronic
Hg19 Start58908848
Hg19 End58908905
Hg38 Start58515065
Hg38 End58515122
Junction Sequence-
Target Gene
Target GeneENSG00000310312, ENSG00000258231
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11967
Virus Breakpoint22088
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-