Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062761

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062761
Fusion NameHBV-ZNF665 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-0305/1
Sample TypeTumor
Age47
GenderFemale
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr19
Cytogenetic Bandq13.42
Human Strand
Human Integration Location Typeintronic
Hg19 Start53662980
Hg19 End53663092
Hg38 Start53159727
Hg38 End53159839
Junction Sequence-
Target Gene
Target GeneZNF665
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint12547
Virus Breakpoint22591
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-