Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062762

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062762
Fusion NameHBV-LINC01732 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-0305/10
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr1
Cytogenetic Bandq25.3
Human Strand
Human Integration Location Typeintronic
Hg19 Start181077304
Hg19 End181077368
Hg38 Start181108168
Hg38 End181108232
Junction Sequence-
Target Gene
Target GeneLINC01732
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1347
Virus Breakpoint2434
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-