| Basic Information ▶ | |
| VISDB ID | TVIS20004899 |
|---|---|
| Fusion Name | HPV-chr20:p11.2 integration |
| Validated | Yes |
| Curated Way | VISDB1.0 |
| Method | Restriction site?polymerase chain reaction (RS?PCR) |
| Wet Assay | Yes |
| Sample ID | CaSki |
| Sample Name | CaSki |
| Sample Type | Cell line |
| Age | - |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Head and neck squamous cell carcinoma |
| Disease Abbreviation | HNSCC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 15146560 |
| Journal | Int J Cancer |
| Published Year | 2004 |
| Human Genome ▶ | |
| Human Genome Version Description | Unknown |
| Human Genome RefSeq Accession | |
| Human Chromosome | chr20 |
| Cytogenetic Band | p11.2 |
| Human Strand | |
| Human Integration Location Type | - |
| Hg19 Start | - |
| Hg19 End | - |
| Hg38 Start | - |
| Hg38 End | - |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | - |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Human Papillomavirus |
| Virus Subtype Name | HPV16 |
| Virus Genome Accession | Not given |
| TaxonomyID | 10566 |
| Virus Abbreviation | HPV |
| Virus Genome | - |
| Virus Genome Length | 7937 |
| Virus Breakpoint1 | - |
| Virus Breakpoint2 | - |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | - |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D