Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS20005132

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS20005132
Fusion NameHPV unknown position integration
ValidatedYes
Curated WayVISDB1.0
MethodDIPS, APOT assay
Wet AssayYes
Sample IDT21
Sample NameT21
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameCervical carcinoma
Disease AbbreviationCC
CancerYes
Literature
PubMed ID12813471
JournalOncogene
Published Year2003
Human Genome
Human Genome Version DescriptionUnknown
Human Genome RefSeq Accession
Human Chromosome-
Cytogenetic Band-
Human Strand
Human Integration Location Type-
Hg19 Start-
Hg19 End-
Hg38 Start-
Hg38 End-
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHuman Papillomavirus
Virus Subtype NameHPV18
Virus Genome AccessionNC_001357
TaxonomyID10566
Virus AbbreviationHPV
Virus Genome-
Virus Genome Length7910
Virus Breakpoint11319
Virus Breakpoint2-
Virus Gene Name E1
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-