Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS20010332

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS20010332
Fusion NameHPV-KIF26B integration
ValidatedNo
Curated WayViMIC
MethodHPV probe capture sequencing
Wet AssayYes
Sample ID-
Sample Name43CIN
Sample TypeNormal
Age-
GenderFemale
Disease Information
Disease Namenormal
Disease Abbreviation-
CancerNo
Literature
PubMed ID30567904
JournalJournal of medical genetics
Published Year2019
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr1
Cytogenetic Bandq44
Human Strand
Human Integration Location Typeintronic
Hg19 Start245786367
Hg19 End-
Hg38 Start245623065
Hg38 End245623066
Junction Sequence-
Target Gene
Target GeneKIF26B
Nearby Gene-
Distance-
Virus Information
Virus NameHuman Papillomavirus
Virus Subtype NameHPV42
Virus Genome Accession-
TaxonomyID10566
Virus AbbreviationHPV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11115
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID5402484