Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS20010352

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS20010352
Fusion NameHPV-USP37 integration
ValidatedNo
Curated WayViMIC
MethodCapture hybridization and next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameCaputure-0730-N7
Sample TypeNormal
Age-
Gender-
Disease Information
Disease Namenormal
Disease Abbreviation-
CancerNo
Literature
PubMed ID31102403
JournalCarcinogenesis
Published Year2019
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr2
Cytogenetic Bandq35
Human Strand
Human Integration Location Typeintronic
Hg19 Start219367597
Hg19 End219367598
Hg38 Start218502874
Hg38 End218502875
Junction Sequence-
Target Gene
Target GeneUSP37
Nearby Gene-
Distance-
Virus Information
Virus NameHuman Papillomavirus
Virus Subtype Name-
Virus Genome AccessionMultiple
TaxonomyID10566
Virus AbbreviationHPV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID5402504