Basic Information ▼ | |
VISDB ID | TVIS20011385 |
---|---|
Fusion Name | HPV-EXOC7 integration |
Validated | No |
Curated Way | ViMIC |
Method | High-throughput Viral Integration Detection method |
Wet Assay | Yes |
Sample ID | - |
Sample Name | HSIL-3 |
Sample Type | Tumor |
Age | - |
Gender | - |
Disease Information ▼ | |
Disease Name | Cervical carcinoma |
Disease Abbreviation | CC |
Cancer | Yes |
Literature ▼ | |
PubMed ID | 33023834 |
Journal | Journal of Genetics and genomics |
Published Year | 2020 |
Human Genome ▼ | |
Human Genome Version Description | GRCh37/hg19 |
Human Genome RefSeq Accession | GCF_000001405.13 |
Human Chromosome | chr17 |
Cytogenetic Band | q25.1 |
Human Strand | + |
Human Integration Location Type | exonic |
Hg19 Start | 74099326 |
Hg19 End | 74099327 |
Hg38 Start | 76103245 |
Hg38 End | 76103246 |
Junction Sequence | - |
Target Gene ▼ | |
Target Gene | EXOC7 |
Nearby Gene | - |
Distance | - |
Virus Information ▼ | |
Virus Name | Human Papillomavirus |
Virus Subtype Name | HpV66 |
Virus Genome Accession | EF177182.1 |
TaxonomyID | 10566 |
Virus Abbreviation | HPV |
Virus Genome | Human papillomavirus type 66 clone Qv35854,completegenome |
Virus Genome Length | 7816 bp |
Virus Breakpoint1 | 7258 |
Virus Breakpoint2 | 7392 |
Virus Gene Name | HpV66gp7_L1//downstream |
Virus Region Type | - |
Integrated Virus Sequence | - |
ViMIC ID | 5403540 |