Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS20013245

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS20013245
Fusion NameHPV-MIR365BHG integration
ValidatedNo
Curated WayCurated
MethodHigh-throughput Viral Integration Detection method
Wet AssayYes
Sample ID18O002587_OC053
Sample Name-
Sample TypeTumor
Age-
GenderFemale
Disease Information
Disease NameCervical cancer
Disease AbbreviationCC
CancerYes
Literature
PubMed ID31258786
JournalJournal of Cancer
Published Year2019
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr17
Cytogenetic Bandq11.2
Human Strand
Human Integration Location Typeintronic
Hg19 Start29901935
Hg19 End29901935
Hg38 Start31574916
Hg38 End31574916
Junction Sequence-
Target Gene
Target GeneMIR365BHG
Nearby Gene-
Distance-
Virus Information
Virus NameHuman Papillomavirus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10566
Virus AbbreviationHPV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-