Basic Information ▼ | |
VISDB ID | TVIS20014484 |
---|---|
Fusion Name | HPV-chr17:81838765 integration |
Validated | No |
Curated Way | Curated |
Method | High-throughput Viral Integration Detection method |
Wet Assay | Yes |
Sample ID | CES4 |
Sample Name | CES4-R/M |
Sample Type | Tumor |
Age | 34 |
Gender | Female |
Disease Information ▼ | |
Disease Name | Cervical Cancer |
Disease Abbreviation | CC |
Cancer | Yes |
Literature ▼ | |
PubMed ID | 33017516 |
Journal | Cancer Medicine |
Published Year | 2020 |
Human Genome ▼ | |
Human Genome Version Description | GRCh37/hg19 |
Human Genome RefSeq Accession | GCF_000001405.13 |
Human Chromosome | chr17 |
Cytogenetic Band | q25.3 |
Human Strand | - |
Human Integration Location Type | intergenic |
Hg19 Start | 79796641 |
Hg19 End | 79796641 |
Hg38 Start | 81838765 |
Hg38 End | 81838765 |
Junction Sequence | - |
Target Gene ▼ | |
Target Gene | - |
Nearby Gene | PPP1R27 |
Distance | 3715 |
Virus Information ▼ | |
Virus Name | Human Papillomavirus |
Virus Subtype Name | HPV16 |
Virus Genome Accession | AF534061 |
TaxonomyID | 10566 |
Virus Abbreviation | HPV |
Virus Genome | Human papillomavirus type 16 East Asian type, complete genome |
Virus Genome Length | 7905 bp |
Virus Breakpoint1 | 4419 |
Virus Breakpoint2 | - |
Virus Gene Name | HpV16gp7_L2 |
Virus Region Type | - |
Integrated Virus Sequence | - |
ViMIC ID | - |