| Basic Information ▶ | |
| VISDB ID | TVIS20014524 |
|---|---|
| Fusion Name | HPV-3:189925788 integration |
| Validated | No |
| Curated Way | Curated |
| Method | Capture-based next-generation sequencing |
| Wet Assay | Yes |
| Sample ID | 72 |
| Sample Name | BC72 |
| Sample Type | Tumor |
| Age | 71 |
| Gender | Male |
| Disease Information ▶ | |
| Disease Name | Bladder Cancer |
| Disease Abbreviation | BC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 33205207 |
| Journal | The Journal of Infectious Diseases |
| Published Year | 2021 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh38/hg38 |
| Human Genome RefSeq Accession | GCF_000001405.40 |
| Human Chromosome | 3 |
| Cytogenetic Band | q28 |
| Human Strand | |
| Human Integration Location Type | intergenic |
| Hg19 Start | - |
| Hg19 End | - |
| Hg38 Start | 189925788 |
| Hg38 End | 189925788 |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | - |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Human Papillomavirus |
| Virus Subtype Name | HPV16 |
| Virus Genome Accession | NS |
| TaxonomyID | 10566 |
| Virus Abbreviation | HPV |
| Virus Genome | - |
| Virus Genome Length | - |
| Virus Breakpoint1 | 3425 |
| Virus Breakpoint2 | - |
| Virus Gene Name | E2, E4 |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | - |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D