Basic Information ▼ | |
VISDB ID | TVIS20020835 |
---|---|
Fusion Name | HPV-chr13:73408635 integration |
Validated | Yes |
Curated Way | Curated |
Method | Long read sequencing |
Wet Assay | Yes |
Sample ID | - |
Sample Name | ZLR-13 |
Sample Type | Tumor |
Age | - |
Gender | Female |
Disease Information ▼ | |
Disease Name | Cervical cancer |
Disease Abbreviation | CC |
Cancer | Yes |
Literature ▼ | |
PubMed ID | 35538075 |
Journal | Nature communications |
Published Year | 2022 |
Human Genome ▼ | |
Human Genome Version Description | GRCh37/hg19 |
Human Genome RefSeq Accession | GCF_000001405.13 |
Human Chromosome | chr13 |
Cytogenetic Band | q22.1 |
Human Strand | |
Human Integration Location Type | intergenic |
Hg19 Start | 73982772 |
Hg19 End | 73982772 |
Hg38 Start | 73408635 |
Hg38 End | 73408635 |
Junction Sequence | - |
Target Gene ▼ | |
Target Gene | - |
Nearby Gene | MARK2P12 |
Distance | 283 |
Virus Information ▼ | |
Virus Name | Human Papillomavirus |
Virus Subtype Name | HPV16 |
Virus Genome Accession | - |
TaxonomyID | 10566 |
Virus Abbreviation | HPV |
Virus Genome | - |
Virus Genome Length | - |
Virus Breakpoint1 | 4686 |
Virus Breakpoint2 | - |
Virus Gene Name | L2 |
Virus Region Type | - |
Integrated Virus Sequence | - |
ViMIC ID | - |