Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS20070168

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS20070168
Fusion NameHPV-chr14:34492648 integration
ValidatedNo
Curated WayCurated
MethodHPV capture sequencing
Wet AssayYes
Sample ID-
Sample Name-
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameCervical adenocarcinoma
Disease AbbreviationAC
CancerYes
Literature
PubMed ID37966613
JournalJournal of Cancer Research and Clinical Oncology
Published Year2023
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr14
Cytogenetic Bandq13.1
Human Strand
Human Integration Location Typeintergenic
Hg19 Start-
Hg19 End-
Hg38 Start34492648
Hg38 End34492648
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneRPL23AP71
Distance6201
Virus Information
Virus NameHuman Papillomavirus
Virus Subtype NameHPV16
Virus Genome Accession-
TaxonomyID10566
Virus AbbreviationHPV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-