Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS30013896

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS30013896
Fusion NameHIV-KIAA0319L integration
ValidatedYes
Curated WayVISDB1.0
MethodInverse nested PCR (invPCR)
Wet AssayYes
Sample IDcase #1
Sample Namecase #1
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameAIDS-associated lymphoma
Disease AbbreviationAAL
CancerYes
Literature
PubMed ID12843741
JournalJ Acquir Immune Defic Syndr
Published Year2003
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr1
Cytogenetic Bandp34.3
Human Strand-
Human Integration Location TypeIntronic
Hg19 Start35986802
Hg19 End35986802
Hg38 Start35521201
Hg38 End35521201
Junction Sequence-
Target Gene
Target GeneKIAA0319L
Nearby Gene-
Distance-
Virus Information
Virus NameHuman Immunodeficiency Virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID11676
Virus AbbreviationHIV
Virus Genome-
Virus Genome Length9719
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-