VISDB 2.0

Basic Information ▶
VISDB ID	TVIS30014670
Fusion Name	HIV-TRDMT1 integration
Validated	Yes
Curated Way	VISDB1.0
Method	ligation mediated PCR
Wet Assay	Yes
Sample ID	PT1
Sample Name	PT1
Sample Type	PBMC
Age	47
Gender	-
Disease Information ▶
Disease Name	HIV-infected disease
Disease Abbreviation	HID
Cancer	No
Literature ▶
PubMed ID	24968937
Journal	Science
Published Year	2014
Human Genome ▶
Human Genome Version Description	GRCh37/hg19
Human Genome RefSeq Accession	GCF_000001405.13
Human Chromosome	chr10
Cytogenetic Band	p13
Human Strand	-
Human Integration Location Type	Intronic
Hg19 Start	17225938
Hg19 End	17225713
Hg38 Start	17183939
Hg38 End	17183939
Junction Sequence	cAAGAATGTACTATTTTTATAATTGGCAAAAAGCAAACAAAAAAATGACTCTTATTTTGGAACGAAAGAATTCAATGCTGCTCTTGGTTTTGACCCTGAGAAACAACAAAAGGAAAGTAACAAGGTCAGACAAGAAAGGTTTGGCTCTTTTCTCAAGGCATGCCAATTGTGCTGTGACCTGTCACAGGCACATACACACCAGTAAACAATTATAACTCATTATAA
Target Gene ▶
Target Gene	TRDMT1
Nearby Gene	-
Distance	-
Virus Information ▶
Virus Name	Human Immunodeficiency Virus
Virus Subtype Name	-
Virus Genome Accession	Not given
TaxonomyID	11676
Virus Abbreviation	HIV
Virus Genome	-
Virus Genome Length	9719
Virus Breakpoint1	-
Virus Breakpoint2	-
Virus Gene Name	-
Virus Region Type	-
Integrated Virus Sequence	-
ViMIC ID	-
Predicted VIS Effect ▶
Gene Id	ENSG00000107614.23
Gene Name	TRDMT1
Region	intron
Impact	intronic_insertion
Transcript	Transcript 1: ENST00000377799.8, Transcript 2: ENST00000354631.7, Transcript 3: ENST00000852531.1, Transcript 4: ENST00000949129.1, Transcript 5: ENST00000929575.1, Transcript 6: ENST00000929576.1, Transcript 7: ENST00000949131.1, Transcript 8: ENST00000929577.1, Transcript 9: ENST00000949130.1, Transcript 10: ENST00000949132.1, Transcript 11: ENST00000852532.1, Transcript 12: ENST00000929578.1, Transcript 13: ENST00000852533.1, Transcript 14: ENST00000929579.1, Transcript 15: ENST00000495022.5, Transcript 16: ENST00000488990.5, Transcript 17: ENST00000525762.5, Transcript 18: ENST00000424636.2, Transcript 19: ENST00000486947.5, Transcript 20: ENST00000451253.5, Transcript 21: ENST00000479046.1

SpliceAI Score
Delta Scores	Acceptor Gain: 0.040 \| Acceptor Loss: 0.030 \| Donor Gain: 0.000 \| Donor Loss: 0.000
Delta Score Max	0.040
Delta Position at Max	0
Delta Score Flag	LOW
Gene	TRDMT1
Altered Protein (FASTA)	>Transcript_1\|ENST00000377799.8 MEPLRVLELYSGVGGMHHALRELYTCTSGGCHCQHCRSIQVFSSHTVTCQDDRHY TRRVQIIFYDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPSYKNYQSIFFWKML KVLKYLLQGPLDTNNRKLWLSVPRVSIISNLSWHSKFKATIFSYCKASVRAITLSSPWSG TDGVPQNICTSTKICNGCRKNSRKERTKYLWQHTVFWKRCHSFANCRRNSQEK STR*SLCENAKRFSRHREPVSFTTKVIAAICSSVRHCSAHLKVRVLYQRYGSYIE GTGSVLQTAEDVQVENIYKWWWDHYLTSEHHTIYLSNKLAHVPLESRSKKKNLPNLHL YHCHFRSRHLIHPLFPLPICHKKNRQSCYLNCDISLLKKQISLDFLQSSFPEKITV KQRYRLLGNSLNVHVVAKLIKILY >Transcript_3\|ENST00000852531.1 MEPLRVLELYSGVGGMHHALRELYTCTSGGCHCQHCR*SIQVFSSHTVTCQDDRHY TRRVQIIFYDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPRTSYKQKIVAFS TKSFYYLQPLLAFQIQGYDIFLLQSFSQSHYPFKPLVRYWSSPKLNLYIHKNMQWMKI KFKKRTLNQILALMAAYSVLEKMPFFLSLKLQKKFTGKINKIVISLKCKIFLKMTLT TSIFYHQSHCCDMLFCTLFSPLVEGPCALPKVWKLHRRDRVCVTDCRGCAGEYLQMVV GSLIPHIASHNIPKQTCTCTPIKLKKKKSTKSSPVSLSFSFSSSDIASPVSLTNLS QEEQITKLLILKLRYFTPKEIANLLGFPPEFVSEDNSETALSPTWKSQRACSSTNQN LI >Transcript_4\|ENST00000949129.1 MEPLRVLELYSGVGGMHHALRELYTCTSGGCHCQHCR*SIQVFSSHTVTCQDDRHY TRRVQIIFYDFNEPSLPAIHKYGSYIEGTGSVLQTAEDVQVENIYKWWWDHYLTSEH HTIYLSNKLAHVPLESRSKKKNLPNLHLYHCHFRSRHLIHPLFPLPICHKKNRQSC YLNCDISLLKKQISLDFLQSSFPEKITVKQRYRLLGNSLNVHVVAKLIKILY >Transcript_5\|ENST00000929575.1 MEPLRVLELYSGVGGMHHALRELYTCTSGGCHCQHCR*SIQVFSSHTVTCQDDRHY TRRVQIIFYDFNEPSLPAIHKDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIA KLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDA ILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTC RSMEATKGQGLCYRLQRMCRLRISTNGGGIIDTSHLSITQYTVTNLHMYPLNLEAEKK KIYQIFTCITVIFVLVIYSIPCFPYQFVTRRTDNKAVNTTAIFHSRNSKSPWISSRV RFLRRQNSVIAYLEIVSTCM*LNSKSYM >Transcript_6\|ENST00000929576.1 MEPLRVLELYSGVGGMHHALRELYTCTSGGCHCQHCRSIQVFSSHTVTCQDDSTD GVPQNICTSTKICNGCRKNSRKERTKYLWQHTVFWKRCHSFANCRRNSQEKST R*SLCENAKRFSRHREPVSFTTKVIAAICSSVRHCSAHLKVRVLYQRYGSYIEGT GSVLQTAEDVQVENIYKWWWDHYLTSEHHTIYLSNKLAHVPLESRSKKKNLPNLHLYH CHFRSRHLIHPLFPLPICHKKNRQSCYLNCDISLLKKQISLDFLQSSFPEKITVKQ RYRLLGNSLNVHVVAKLIKILY >Transcript_7\|ENST00000949131.1 MEPLRVLELYSGVGGMHHALRELYTCTSGGCHCQHCR*SIQVFSSHTVTCQDDRHY TRRVQIIFYDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPSYKNYQSIFFWKML KVLKYLLQGPLDTNNRKLWLSVPRVSIISNLCTDGVPQNICTSTKICNGCRKNSRKER TKYLWQHTVFWKRCHSFANCRRNSQEKSTR*SLCENAKRFSRHREPVSFTT KVIAAICSSVRHCSAHLKVRVLYQRYGSYIEGTGSVLQTAEDVQVENIYKWWWDHYLT SEHHTIYLSNKLAHVPLESRSKKKNLPNLHLYHCHFRSRHLIHPLFPLPICHKKNRQ SCYLNCDISLLKKQISLDFLQSSFPEKITVKQRYRLLGNSLNVHVVAKLIKILY >Transcript_8\|ENST00000929577.1 MEPLRVLELYSGVGGMHHALRELYTCTSGGCHCQHCR*SIQVFSSHTVTCQDDIFF FSFRPLDTNNRKLWLSVPRVSIISNLSWHSKFKATIFSYCKASVRAITLSSPWSGTDGV PQNICTSTKICNGCRKNSRKERTKYLWQHTVFWKRCHSFANCRRNSQEKSTR SLCENAKRFSRHREPVSFTTKVIAAICSSVRHCSAHLKVRVLYQRYGSYIEGTGS VLQTAEDVQVENIYKWWWDHYLTSEHHTIYLSNKLAHVPLESRSKKKNLPNLHLYHCH FRSRHLIHPLFPLPICHKKNRQSCYLNCDISLLKKQISLDFLQSSFPEKITVKQRY RLLGNSLNVHVVAKLIKILY >Transcript_9\|ENST00000949130.1 MEPLRVLELYSGVGGMHHALRELYTCTSGGCHCQHCR*SIQVFSSHTVTCQDDRHY TRRVQIIFYDFNEPSLPAIHKDLLIQTIENCGFQYQEFLLSPTSVLMEFPKIESVHPQ KYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKD FLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGMEATKGQGLCYRLQRMCR LRISTNGGGIIDTSHLSITQYTVTNLHMYPLNLEAEKKKIYQIFTCITVIFVLVIYSI PCFPYQFVTRRTDNKAVNTTAIFHSRNSKSPWISSRVRFLRRQNSVIAYLEIVSTC M*LNSKSYM >Transcript_10\|ENST00000949132.1 MEPLRVLELYSGVGGMHHALRELYTCTSGGCHCQHCRSIQVFSSHTVTCQDDRHY TRRVQIIFYDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPSYKNYQSIFFWKML KVLKYLLQGPLDTNNRKLWLSVPRVSIISNLSWHSKFKATIFSYCKASVRAITLSSPWSA NCRRNSQEKSTR*SLCENAKRFSRHREPVSFTTKVIAAICSSVRHCSAHLKVRV LYQRYGSYIEGTGSVLQTAEDVQVENIYKWWWDHYLTSEHHTIYLSNKLAHVPLESRS* KKKNLPNLHLYHCHFRSRHLIHPLFPLPICHKKNRQSCYLNCDISLLKKQISLDFL QSSFPEKITVKQRYRLLGNSLNVHVVAKLIKILY >Transcript_11\|ENST00000852532.1 MEPLRVLELYSGVGGMHHALRELYTCTSGGCHCQHCRSIQVFSSHTVTCQDDRHY TRRVQIIFYDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPSYKNYQSIFFWKML KVLKYLLQGPLDTNNRKLWLSVPRVSIISNLSWHSKFKATIFSYCKASVRAITLSSPWSG TDGVPQNICTSTKICNGCRKNSRKERTKYLWQHTVFWKRCHSFANCRRNSQEK STR*SLCENAKRFSRHREPVSFTTKVIAAICSSVRHCSAHLKYGSYIEGTGSVLQ TAEDVQVENIYKWWWDHYLTSEHHTIYLSNKLAHVPLESRSKKKNLPNLHLYHCHFRS RHLIHPLFPLPICHKKNRQSCYLNCDISLLKKQISLDFLQSSFPEKITVKQRYRLL GNSLNVHVVAKLIKILY >Transcript_12\|ENST00000929578.1 MEPLRVLELYSGVGGMHHALRDSIYHYRKLYTCTSGGCHCQHCR*SIQVFSSHTVTC QDDRHYTRRVQIIFYDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPSYKNYQS IFFWKMLKVLKYLLQGPLDTNNRKLWLSVPRVSIISNLSWHSKFKATIFSYCKASVRAIT LSSPWSGTDGVPQNICTSTKICNGCRKNSRKERTKYLWQHTVFWKRCHSFANC RRNSQEKSTR*SLCENAKRFSRHREPVSFTTKVIAAICSSVRHCSAHLKVRVLYQ RYGSYIEGTGSVLQTAEDVQVENIYKWWWDHYLTSEHHTIYLSNKLAHVPLESRSKKK NLPNLHLYHCHFRSRHLIHPLFPLPICHKKNRQSCYLNCDISLLKKQISLDFLQSS FPEKITVKQRYRLLGNSLNVHVVAKLIKILY >Transcript_13\|ENST00000852533.1 MEPLRVLELYSGVGGMHHALRELYTCTSGGCHCQHCR*SIQVFSSHTVTCQDDRHY TRRVQIIFYDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPRTSYKQKIVAFS TKSFYYLQPLLAFQIQGYDIFLLQSFSQSHYPFKPLVRYWSSPKLNLYIHKNMQWMKI KFKKRTLNQILALMAAYSVLEKMPFFLSLKLQKKFTGKINKIVISLKCKIFLKMTLT TSIFYHQSHCCDMLFCTLFSPLVEVWKLHRRDRVCVTDCRGCAGEYLQMVVGSLIPHI ASHNIPKQTCTCTPIKLKKKKSTKSSPVSLSFSFSSSDIASPVSLTNLSQEEQITK LLILKLRYFTPKEIANLLGFPPEFVSEDNSETALSPTWKSQRACSSTNQNLI >Transcript_14\|ENST00000929579.1 MEPLRVLELYSGVGGMHHALRGIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEIGRQ GDMTDSRTNSFLHILDILPSYKNYQSIFFWKMLKVLKYLLQGPLDTNNRKLWLSVPRVSI ISNLSWHSKFKATIFSYCKASVRAITLSSPWSGTDGVPQNICTSTKICNGCRKNSRKE RTKYLWQHTVFWKRCHSFANCRRNSQEKSTR*SLCENAKRFSRHREPVSFT TKVIAAICSSVRHCSAHLKVRVLYQRYGSYIEGTGSVLQTAEDVQVENIYKWWWDHYL TSEHHTIYLSNKLAHVPLESRSKKKNLPNLHLYHCHFRSRHLIHPLFPLPICHKKNR* QSCYLNCDISLLKKQISLDFLQSSFPEKITVKQRYRLLGNSLNVHVVAKLIKILY >Transcript_16\|ENST00000488990.5 MEPLRVLELYSGVGGMHHALRELYTCTSGGCHCQHCRSIQVFSSHTVTCQDDSTD GVPQNICTSTKICNGCRKNSRKERTKYLWQHTVFWKRCHSFANCRRNSQEKST R*SLCENAKRFSRHREPVSFTTKVIAAICSSVRHCSAHLKVRVLYQRYGSYIEGT GSVLQTAEDVQVENIYKWWWDHYLTSEHHTIYLSNKLAHVPLESRSKKKNLPNLHLYH CHFRSRHLIHPLFPLPICHKKNRQSCYLNCDISLLKK*QISLDFLQSSVCGIRAEFS FHVLKLSKI

AlphaGenome Analysis
Window	chr10:17118403-17249475
RNA-seq Change (±2kb)	Mean: -0.00017916930664796382 \| Peak: 0.0848388671875
ATAC Change (±2kb)	Mean: 0.00725508900359273 \| Peak: 2.5030517578125
Interpretation	RNA-seq: no signal in region (REF≈0, ALT≈0) \| Splice sites: no signal in region (REF≈0, ALT≈0) \| ATAC: INCREASED 24.6% (REF=0.03, ALT=0.04)
Visualization

>Transcript_1|ENST00000377799.8
MEPLRVLELYSGVGGMHHALRELYTCTSGGCH*CQHCR**SIQV*FSSHTVTCQDD*RHY
TRRV*QIIF*YDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPSYKNYQSIFFWKML
KVLKYLLQGPLDTNNRKLWLSVPRVSIISNLSWHSKFKATIFSYCKASVRAITLSSPWSG
TDGVPQN*ICTSTKICNGCRK*NSRKER*TKY*L*WQHTVFWKRCHSF*A*NCRRNSQEK
STR**SLCENAKRFS*R*H*REPVSFTTKVIAAICSSVRHCSAHL*KVRVLYQRYGSYIE
GTGSVLQTAEDVQVENIYKWWWDH*YLTSEHHTIYLSNKLAHVPLESRS*KKKNLPNLHL
YHCHFRSRHLI*HPLFPLPICHKKNR*QSC*YLNCDISLLKK*QISLDFLQSSFPEKITV
KQRYRLLGNSLNVHVVAKLIKILY

>Transcript_3|ENST00000852531.1
MEPLRVLELYSGVGGMHHALRELYTCTSGGCH*CQHCR**SIQV*FSSHTVTCQDD*RHY
TRRV*QIIF*YDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPRTS*YKQ*KIVAFS
TKSFYYLQPLLAFQIQGYDIFLLQSFSQSHYPFKPLVRY*WSSPKLNLYIHKNMQWM*KI
KFKKRTLNQILALMAAYSVLEKMPFFLSLKLQKKFTGKINKIVISL*KC*KIFLKMTLT*
TSIFYHQSHCCDMLFC*TLFSPLVEGPCALPKVWKLHRRDRVCVTDCRGCAG*EYLQMVV
GSLIPHI*ASHNIPK*QTCTCTP*I*KLKKKKSTKSSPVSLSFSFSSSDIASPVSLTNLS
QEEQITKLLILKLRYFTPKEIANLLGFPPEFVS*EDNSETALSPTWK*SQRACSS*TNQN
LI

>Transcript_4|ENST00000949129.1
MEPLRVLELYSGVGGMHHALRELYTCTSGGCH*CQHCR**SIQV*FSSHTVTCQDD*RHY
TRRV*QIIF*YDFNEPSLPAIHKYGSYIEGTGSVLQTAEDVQVENIYKWWWDH*YLTSEH
HTIYLSNKLAHVPLESRS*KKKNLPNLHLYHCHFRSRHLI*HPLFPLPICHKKNR*QSC*
YLNCDISLLKK*QISLDFLQSSFPEKITVKQRYRLLGNSLNVHVVAKLIKILY

>Transcript_5|ENST00000929575.1
MEPLRVLELYSGVGGMHHALRELYTCTSGGCH*CQHCR**SIQV*FSSHTVTCQDD*RHY
TRRV*QIIF*YDFNEPSLPAIHKDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIA
KLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDA
ILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTC
RSMEAT*KGQGLCYRLQRMCRLRISTNGGGIIDTSHLSITQYT*VTNLHMYPLNLEAEKK
KIYQIFTCITVIFVLVI*YSIPCFPYQFVTRRTDNKAVNT*TAIFHS*RNSKSPWISSRV
RFLRR*Q*NSVIAYLEIVSTCM**LN*SKSYM

>Transcript_6|ENST00000929576.1
MEPLRVLELYSGVGGMHHALRELYTCTSGGCH*CQHCR**SIQV*FSSHTVTCQDD*STD
GVPQN*ICTSTKICNGCRK*NSRKER*TKY*L*WQHTVFWKRCHSF*A*NCRRNSQEKST
R**SLCENAKRFS*R*H*REPVSFTTKVIAAICSSVRHCSAHL*KVRVLYQRYGSYIEGT
GSVLQTAEDVQVENIYKWWWDH*YLTSEHHTIYLSNKLAHVPLESRS*KKKNLPNLHLYH
CHFRSRHLI*HPLFPLPICHKKNR*QSC*YLNCDISLLKK*QISLDFLQSSFPEKITVKQ
RYRLLGNSLNVHVVAKLIKILY

>Transcript_7|ENST00000949131.1
MEPLRVLELYSGVGGMHHALRELYTCTSGGCH*CQHCR**SIQV*FSSHTVTCQDD*RHY
TRRV*QIIF*YDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPSYKNYQSIFFWKML
KVLKYLLQGPLDTNNRKLWLSVPRVSIISNLCTDGVPQN*ICTSTKICNGCRK*NSRKER
*TKY*L*WQHTVFWKRCHSF*A*NCRRNSQEKSTR**SLCENAKRFS*R*H*REPVSFTT
KVIAAICSSVRHCSAHL*KVRVLYQRYGSYIEGTGSVLQTAEDVQVENIYKWWWDH*YLT
SEHHTIYLSNKLAHVPLESRS*KKKNLPNLHLYHCHFRSRHLI*HPLFPLPICHKKNR*Q
SC*YLNCDISLLKK*QISLDFLQSSFPEKITVKQRYRLLGNSLNVHVVAKLIKILY

>Transcript_8|ENST00000929577.1
MEPLRVLELYSGVGGMHHALRELYTCTSGGCH*CQHCR**SIQV*FSSHTVTCQDD*IFF
FSF*RPLDTNNRKLWLSVPRVSIISNLSWHSKFKATIFSYCKASVRAITLSSPWSGTDGV
PQN*ICTSTKICNGCRK*NSRKER*TKY*L*WQHTVFWKRCHSF*A*NCRRNSQEKSTR*
*SLCENAKRFS*R*H*REPVSFTTKVIAAICSSVRHCSAHL*KVRVLYQRYGSYIEGTGS
VLQTAEDVQVENIYKWWWDH*YLTSEHHTIYLSNKLAHVPLESRS*KKKNLPNLHLYHCH
FRSRHLI*HPLFPLPICHKKNR*QSC*YLNCDISLLKK*QISLDFLQSSFPEKITVKQRY
RLLGNSLNVHVVAKLIKILY

>Transcript_9|ENST00000949130.1
MEPLRVLELYSGVGGMHHALRELYTCTSGGCH*CQHCR**SIQV*FSSHTVTCQDD*RHY
TRRV*QIIF*YDFNEPSLPAIHKDLLIQTIENCGFQYQEFLLSPTSVLMEFPKIESVHPQ
KYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKD
FLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGMEAT*KGQGLCYRLQRMCR
LRISTNGGGIIDTSHLSITQYT*VTNLHMYPLNLEAEKKKIYQIFTCITVIFVLVI*YSI
PCFPYQFVTRRTDNKAVNT*TAIFHS*RNSKSPWISSRVRFLRR*Q*NSVIAYLEIVSTC
M**LN*SKSYM

>Transcript_10|ENST00000949132.1
MEPLRVLELYSGVGGMHHALRELYTCTSGGCH*CQHCR**SIQV*FSSHTVTCQDD*RHY
TRRV*QIIF*YDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPSYKNYQSIFFWKML
KVLKYLLQGPLDTNNRKLWLSVPRVSIISNLSWHSKFKATIFSYCKASVRAITLSSPWSA
*NCRRNSQEKSTR**SLCENAKRFS*R*H*REPVSFTTKVIAAICSSVRHCSAHL*KVRV
LYQRYGSYIEGTGSVLQTAEDVQVENIYKWWWDH*YLTSEHHTIYLSNKLAHVPLESRS*
KKKNLPNLHLYHCHFRSRHLI*HPLFPLPICHKKNR*QSC*YLNCDISLLKK*QISLDFL
QSSFPEKITVKQRYRLLGNSLNVHVVAKLIKILY

>Transcript_11|ENST00000852532.1
MEPLRVLELYSGVGGMHHALRELYTCTSGGCH*CQHCR**SIQV*FSSHTVTCQDD*RHY
TRRV*QIIF*YDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPSYKNYQSIFFWKML
KVLKYLLQGPLDTNNRKLWLSVPRVSIISNLSWHSKFKATIFSYCKASVRAITLSSPWSG
TDGVPQN*ICTSTKICNGCRK*NSRKER*TKY*L*WQHTVFWKRCHSF*A*NCRRNSQEK
STR**SLCENAKRFS*R*H*REPVSFTTKVIAAICSSVRHCSAHL*KYGSYIEGTGSVLQ
TAEDVQVENIYKWWWDH*YLTSEHHTIYLSNKLAHVPLESRS*KKKNLPNLHLYHCHFRS
RHLI*HPLFPLPICHKKNR*QSC*YLNCDISLLKK*QISLDFLQSSFPEKITVKQRYRLL
GNSLNVHVVAKLIKILY

>Transcript_12|ENST00000929578.1
MEPLRVLELYSGVGGMHHALRDSIYHYRKLYTCTSGGCH*CQHCR**SIQV*FSSHTVTC
QDD*RHYTRRV*QIIF*YDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPSYKNYQS
IFFWKMLKVLKYLLQGPLDTNNRKLWLSVPRVSIISNLSWHSKFKATIFSYCKASVRAIT
LSSPWSGTDGVPQN*ICTSTKICNGCRK*NSRKER*TKY*L*WQHTVFWKRCHSF*A*NC
RRNSQEKSTR**SLCENAKRFS*R*H*REPVSFTTKVIAAICSSVRHCSAHL*KVRVLYQ
RYGSYIEGTGSVLQTAEDVQVENIYKWWWDH*YLTSEHHTIYLSNKLAHVPLESRS*KKK
NLPNLHLYHCHFRSRHLI*HPLFPLPICHKKNR*QSC*YLNCDISLLKK*QISLDFLQSS
FPEKITVKQRYRLLGNSLNVHVVAKLIKILY

>Transcript_13|ENST00000852533.1
MEPLRVLELYSGVGGMHHALRELYTCTSGGCH*CQHCR**SIQV*FSSHTVTCQDD*RHY
TRRV*QIIF*YDFNEPSLPAIHKIGRQGDMTDSRTNSFLHILDILPRTS*YKQ*KIVAFS
TKSFYYLQPLLAFQIQGYDIFLLQSFSQSHYPFKPLVRY*WSSPKLNLYIHKNMQWM*KI
KFKKRTLNQILALMAAYSVLEKMPFFLSLKLQKKFTGKINKIVISL*KC*KIFLKMTLT*
TSIFYHQSHCCDMLFC*TLFSPLVEVWKLHRRDRVCVTDCRGCAG*EYLQMVVGSLIPHI
*ASHNIPK*QTCTCTP*I*KLKKKKSTKSSPVSLSFSFSSSDIASPVSLTNLSQEEQITK
LLILKLRYFTPKEIANLLGFPPEFVS*EDNSETALSPTWK*SQRACSS*TNQNLI

>Transcript_14|ENST00000929579.1
MEPLRVLELYSGVGGMHHALRGIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEIGRQ
GDMTDSRTNSFLHILDILPSYKNYQSIFFWKMLKVLKYLLQGPLDTNNRKLWLSVPRVSI
ISNLSWHSKFKATIFSYCKASVRAITLSSPWSGTDGVPQN*ICTSTKICNGCRK*NSRKE
R*TKY*L*WQHTVFWKRCHSF*A*NCRRNSQEKSTR**SLCENAKRFS*R*H*REPVSFT
TKVIAAICSSVRHCSAHL*KVRVLYQRYGSYIEGTGSVLQTAEDVQVENIYKWWWDH*YL
TSEHHTIYLSNKLAHVPLESRS*KKKNLPNLHLYHCHFRSRHLI*HPLFPLPICHKKNR*
QSC*YLNCDISLLKK*QISLDFLQSSFPEKITVKQRYRLLGNSLNVHVVAKLIKILY

>Transcript_16|ENST00000488990.5
MEPLRVLELYSGVGGMHHALRELYTCTSGGCH*CQHCR**SIQV*FSSHTVTCQDD*STD
GVPQN*ICTSTKICNGCRK*NSRKER*TKY*L*WQHTVFWKRCHSF*A*NCRRNSQEKST
R**SLCENAKRFS*R*H*REPVSFTTKVIAAICSSVRHCSAHL*KVRVLYQRYGSYIEGT
GSVLQTAEDVQVENIYKWWWDH*YLTSEHHTIYLSNKLAHVPLESRS*KKKNLPNLHLYH
CHFRSRHLI*HPLFPLPICHKKNR*QSC*YLNCDISLLKK*QISLDFLQSSVCGIRAEFS
FHVLKLSKI

Virus Integration Site Database Data Release 2.0

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Details for VISDB ID: TVIS30014670

Genomic Region Visualization (IGV)