Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS30017995

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS30017995
Fusion NameHIV-chr7:104236763 integration
ValidatedNo
Curated WayCurated
MethodLinker-mediated PCR (LM-PCR) and high-throughput sequencing
Wet AssayYes
Sample ID-
Sample NameKNI
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33844021
JournalThe Journal of Infectious Diseases
Published Year2022
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr7
Cytogenetic Bandq22.2
Human Strand+
Human Integration Location Typeintergenic
Hg19 Start103877211
Hg19 End103877211
Hg38 Start104236763
Hg38 End104236763
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHuman Immunodeficiency Virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID11676
Virus AbbreviationHIV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-