Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS30077413

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS30077413
Fusion NameHIV-RBBP6 integration
ValidatedNo
Curated WayCurated
MethodLinear Target Amplification PCR (LTA-PCR) and sequenicng method
Wet AssayYes
Sample ID-
Sample Name5
Sample TypePatient
Age53
GenderMale
Disease Information
Disease NameAcute antietroviral therapy
Disease AbbreviationAcute-ART
CancerNo
Literature
PubMed ID39788938
JournalSignal Transduction and Targeted Therapy
Published Year2025
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr16
Cytogenetic Bandp12.1
Human Strand
Human Integration Location Typeintronic
Hg19 Start-
Hg19 End-
Hg38 Start24564247
Hg38 End24564247
Junction Sequence-
Target Gene
Target GeneRBBP6
Nearby Gene-
Distance-
Virus Information
Virus NameHuman Immunodeficiency Virus
Virus Subtype Name-
Virus Genome AccessionHXB2
TaxonomyID11676
Virus AbbreviationHIV
Virus GenomeHuman immunodeficiency virus type 1 (HXB2), complete genome; HIV1/HTLV-III/LAV reference genome
Virus Genome Length9719 bp
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-