Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS30077581

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS30077581
Fusion NameHIV-C20orf203 integration
ValidatedNo
Curated WayCurated
MethodLinear Target Amplification PCR (LTA-PCR) and sequenicng method
Wet AssayYes
Sample ID-
Sample Name8
Sample TypePatient
Age24
GenderMale
Disease Information
Disease NameAcute antietroviral therapy
Disease AbbreviationAcute-ART
CancerNo
Literature
PubMed ID39788938
JournalSignal Transduction and Targeted Therapy
Published Year2025
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr20
Cytogenetic Bandq11.21
Human Strand
Human Integration Location Typeexonic
Hg19 Start-
Hg19 End-
Hg38 Start32632190
Hg38 End32632190
Junction Sequence-
Target Gene
Target GeneC20orf203, ENSG00000285382
Nearby Gene-
Distance-
Virus Information
Virus NameHuman Immunodeficiency Virus
Virus Subtype Name-
Virus Genome AccessionHXB2
TaxonomyID11676
Virus AbbreviationHIV
Virus GenomeHuman immunodeficiency virus type 1 (HXB2), complete genome; HIV1/HTLV-III/LAV reference genome
Virus Genome Length9719 bp
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-