Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS30077718

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS30077718
Fusion NameHIV-ENSG00000260661 integration
ValidatedNo
Curated WayCurated
MethodLinear Target Amplification PCR (LTA-PCR) and sequenicng method
Wet AssayYes
Sample ID-
Sample Name10
Sample TypePatient
Age51
GenderMale
Disease Information
Disease NameAcute antietroviral therapy
Disease AbbreviationAcute-ART
CancerNo
Literature
PubMed ID39788938
JournalSignal Transduction and Targeted Therapy
Published Year2025
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr15
Cytogenetic Bandq26.1
Human Strand
Human Integration Location Typeintronic
Hg19 Start-
Hg19 End-
Hg38 Start92254834
Hg38 End92254834
Junction Sequence-
Target Gene
Target GeneENSG00000260661
Nearby Gene-
Distance-
Virus Information
Virus NameHuman Immunodeficiency Virus
Virus Subtype Name-
Virus Genome AccessionHXB2
TaxonomyID11676
Virus AbbreviationHIV
Virus GenomeHuman immunodeficiency virus type 1 (HXB2), complete genome; HIV1/HTLV-III/LAV reference genome
Virus Genome Length9719 bp
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-