Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS30077978

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS30077978
Fusion NameHIV-chr2:30861115 integration
ValidatedNo
Curated WayCurated
MethodLinear Target Amplification PCR (LTA-PCR) and sequenicng method
Wet AssayYes
Sample ID-
Sample Name10
Sample TypePatient
Age51
GenderMale
Disease Information
Disease NameAcute antietroviral therapy
Disease AbbreviationAcute-ART
CancerNo
Literature
PubMed ID39788938
JournalSignal Transduction and Targeted Therapy
Published Year2025
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr2
Cytogenetic Bandp23.1
Human Strand
Human Integration Location Typeintergenic
Hg19 Start-
Hg19 End-
Hg38 Start30861115
Hg38 End30861115
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneENSG00000299677
Distance340
Virus Information
Virus NameHuman Immunodeficiency Virus
Virus Subtype Name-
Virus Genome AccessionHXB2
TaxonomyID11676
Virus AbbreviationHIV
Virus GenomeHuman immunodeficiency virus type 1 (HXB2), complete genome; HIV1/HTLV-III/LAV reference genome
Virus Genome Length9719 bp
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-