Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS30079617

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS30079617
Fusion NameHIV-chr6:35184493 integration
ValidatedNo
Curated WayCurated
MethodLinear Target Amplification PCR (LTA-PCR) and sequenicng method
Wet AssayYes
Sample ID-
Sample Name19
Sample TypePatient
Age21
GenderMale
Disease Information
Disease NameAcute antietroviral therapy
Disease AbbreviationAcute-ART
CancerNo
Literature
PubMed ID39788938
JournalSignal Transduction and Targeted Therapy
Published Year2025
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr6
Cytogenetic Bandp21.31
Human Strand
Human Integration Location Typeintergenic
Hg19 Start-
Hg19 End-
Hg38 Start35184493
Hg38 End35184493
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneENSG00000305352
Distance7476
Virus Information
Virus NameHuman Immunodeficiency Virus
Virus Subtype Name-
Virus Genome AccessionHXB2
TaxonomyID11676
Virus AbbreviationHIV
Virus GenomeHuman immunodeficiency virus type 1 (HXB2), complete genome; HIV1/HTLV-III/LAV reference genome
Virus Genome Length9719 bp
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-