| Basic Information ▶ | |
| VISDB ID | TVIS30083572 |
|---|---|
| Fusion Name | HIV-SGCD integration |
| Validated | No |
| Curated Way | Curated |
| Method | Linear Target Amplification PCR (LTA-PCR) and sequenicng method |
| Wet Assay | Yes |
| Sample ID | - |
| Sample Name | 56 |
| Sample Type | Patient |
| Age | 22 |
| Gender | Male |
| Disease Information ▶ | |
| Disease Name | AIDS |
| Disease Abbreviation | - |
| Cancer | No |
| Literature ▶ | |
| PubMed ID | 39788938 |
| Journal | Signal Transduction and Targeted Therapy |
| Published Year | 2025 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh38/hg38 |
| Human Genome RefSeq Accession | GCF_000001405.40 |
| Human Chromosome | chr5 |
| Cytogenetic Band | q33.2 |
| Human Strand | |
| Human Integration Location Type | intronic |
| Hg19 Start | - |
| Hg19 End | - |
| Hg38 Start | 156267380 |
| Hg38 End | 156267380 |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | SGCD |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Human Immunodeficiency Virus |
| Virus Subtype Name | - |
| Virus Genome Accession | HXB2 |
| TaxonomyID | 11676 |
| Virus Abbreviation | HIV |
| Virus Genome | Human immunodeficiency virus type 1 (HXB2), complete genome; HIV1/HTLV-III/LAV reference genome |
| Virus Genome Length | 9719 bp |
| Virus Breakpoint1 | - |
| Virus Breakpoint2 | - |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | - |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D