| Basic Information ▶ | |
| VISDB ID | TVIS42000942 |
|---|---|
| Fusion Name | EBV-NHEJ1 integration |
| Validated | Yes |
| Curated Way | VISDB1.0 |
| Method | Sanger sequencing |
| Wet Assay | Yes |
| Sample ID | NKTCL Sample |
| Sample Name | NKTCL Sample |
| Sample Type | Tumor |
| Age | - |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Extranodal natural killer T-cell lymphoma |
| Disease Abbreviation | - |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 30546078 |
| Journal | Leukemia |
| Published Year | 2018 |
| Human Genome ▶ | |
| Human Genome Version Description | |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr2 |
| Cytogenetic Band | q35 |
| Human Strand | + |
| Human Integration Location Type | Exonic |
| Hg19 Start | 219973787 |
| Hg19 End | 219973770 |
| Hg38 Start | 219109048 |
| Hg38 End | 219109065 |
| Junction Sequence | AGAATAAGAGTGAGATA |
| Target Gene ▶ | |
| Target Gene | NHEJ1, ENSG00000280537 |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Epstein-Barr Virus |
| Virus Subtype Name | - |
| Virus Genome Accession | NC007605 |
| TaxonomyID | 10376 |
| Virus Abbreviation | EBV |
| Virus Genome | Human gammaherpesvirus 4, complete genome |
| Virus Genome Length | 171823 |
| Virus Breakpoint1 | 6955 |
| Virus Breakpoint2 | 7064 |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | AGGACAGCCGTTGCCCTAGTGGTTTCGGACACACCGCCAACGCTCAGTGCGGTGCTACCGACCCGAGGTCAAGTCCCGGGGGAGGAGAAGAGAGGCTTCCCGCCTAGA |
| ViMIC ID | - |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D