Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS42000976

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS42000976
Fusion NameEBV-ADCY10 integration
ValidatedNo
Curated WayVISDB1.0
MethodGenCap Enrichment+Illumina HiSeq 2000
Wet AssayNo
Sample IDGCT015
Sample NameGCT015
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameGastric carcinoma
Disease AbbreviationGC
CancerYes
Literature
PubMed ID30867819
JournalJournal of Virology
Published Year2015
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr1
Cytogenetic Bandq24.2
Human Strand-
Human Integration Location TypeIntronic
Hg19 Start167819442
Hg19 End167819442
Hg38 Start167850204
Hg38 End167850204
Junction Sequence-
Target Gene
Target GeneADCY10
Nearby Gene-
Distance-
Virus Information
Virus NameEpstein-Barr Virus
Virus Subtype Name-
Virus Genome AccessionNC007605
TaxonomyID10376
Virus AbbreviationEBV
Virus GenomeHuman gammaherpesvirus 4, complete genome
Virus Genome Length171823
Virus Breakpoint189832
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus SequenceTCTTACCCTGGGTGGCAAAAAGTATGCCAGGAGTAGAACAATAACAAGTGCGATGGCGGTAAACAATGGCACCCTCACCTGCTTAAATGAAACCATGGCA| |ACCACTTCAAAGAGAGCCGACAGGAAGATATTTATTAATATTCCATTAGTAAACGAGGCGTGAAGCAGGCGTGGTTTCAATAACGGGAGTTAGAAATTTA
ViMIC ID-