Basic Information ▼ | |
VISDB ID | TVIS42001115 |
---|---|
Fusion Name | EBV-chr11:q23.3 integration |
Validated | No |
Curated Way | VISDB1.0 |
Method | GenCap Enrichment+Illumina HiSeq 2000 |
Wet Assay | No |
Sample ID | NPCT017 |
Sample Name | NPCT017 |
Sample Type | Tumor |
Age | - |
Gender | - |
Disease Information ▼ | |
Disease Name | Nasopharyngeal carcinoma |
Disease Abbreviation | NPC |
Cancer | Yes |
Literature ▼ | |
PubMed ID | 30867819 |
Journal | Journal of Virology |
Published Year | 2015 |
Human Genome ▼ | |
Human Genome Version Description | GRCh37/hg19 |
Human Genome RefSeq Accession | GCF_000001405.13 |
Human Chromosome | chr11 |
Cytogenetic Band | q23.3 |
Human Strand | + |
Human Integration Location Type | Intergenic |
Hg19 Start | 116064662 |
Hg19 End | 116064662 |
Hg38 Start | 116193945 |
Hg38 End | 116193945 |
Junction Sequence | - |
Target Gene ▼ | |
Target Gene | - |
Nearby Gene | - |
Distance | - |
Virus Information ▼ | |
Virus Name | Epstein-Barr Virus |
Virus Subtype Name | - |
Virus Genome Accession | NC007605 |
TaxonomyID | 10376 |
Virus Abbreviation | EBV |
Virus Genome | Human gammaherpesvirus 4, complete genome |
Virus Genome Length | 171823 |
Virus Breakpoint1 | 99594 |
Virus Breakpoint2 | - |
Virus Gene Name | - |
Virus Region Type | - |
Integrated Virus Sequence | TGTAAATAAAATGTCATAACCTGGAGTCTGCATGTCTGTTGTTTTATTCAGTAAACCAGTAGTGCGCGTGAGTTCTTTAGGGCATCCACGATGTAGCCGC| |TCGCGGGGTTCCCCTCCCCAGTGATCATCTCGGATAGGGGATTCCTGTCCATGACCACGCAATTAGAGTGCCGGGCCCGGGACAGCGCCACATACACATG |
ViMIC ID | - |