Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS42001146

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS42001146
Fusion NameEBV-ENSG00000260271 integration
ValidatedNo
Curated WayViMIC
MethodRNA sequencing
Wet AssayYes
Sample ID-
Sample Name-
Sample TypeCell line
Age-
Gender-
Disease Information
Disease NameB-cell lymphoma
Disease AbbreviationBCL
CancerYes
Literature
PubMed ID25485619
JournalNature Biotechnology
Published Year2015
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr6
Cytogenetic Bandq15
Human Strand
Human Integration Location Typeexonic
Hg19 Start91005087
Hg19 End91006484
Hg38 Start90295368
Hg38 End90296765
Junction Sequence-
Target Gene
Target GeneENSG00000260271, BACH2
Nearby Gene-
Distance-
Virus Information
Virus NameEpstein-Barr Virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10376
Virus AbbreviationEBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID3100002