Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS42001244

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS42001244
Fusion NameEBV-DRAIC integration
ValidatedNo
Curated WayViMIC
MethodWhole genome and RNA sequencing
Wet AssayYes
Sample IDP4T
Sample NameP4T
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameLung carcinoma
Disease Abbreviation-
CancerYes
Literature
PubMed ID33414372
JournalSignal Transduction and Targeted Therapy
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr15
Cytogenetic Bandq23
Human Strand
Human Integration Location Typeintronic
Hg19 Start69872074
Hg19 End69872074
Hg38 Start69579735
Hg38 End69579735
Junction Sequence-
Target Gene
Target GeneDRAIC
Nearby Gene-
Distance-
Virus Information
Virus NameEpstein-Barr Virus
Virus Subtype Name-
Virus Genome AccessionNC_007605.1
TaxonomyID10376
Virus AbbreviationEBV
Virus GenomeHuman gammaherpesvirus 4, complete genome
Virus Genome Length171823 bp
Virus Breakpoint1122505
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID3300039