| Basic Information ▶ | |
| VISDB ID | TVIS42001300 |
|---|---|
| Fusion Name | EBV-CAST integration |
| Validated | No |
| Curated Way | ViMIC |
| Method | Whole genome and RNA sequencing |
| Wet Assay | Yes |
| Sample ID | P3T |
| Sample Name | P3T |
| Sample Type | Tumor |
| Age | - |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Lung carcinoma |
| Disease Abbreviation | - |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 33414372 |
| Journal | Signal Transduction and Targeted Therapy |
| Published Year | 2021 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh37/hg19 |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr5 |
| Cytogenetic Band | q15 |
| Human Strand | |
| Human Integration Location Type | intronic |
| Hg19 Start | 95498387 |
| Hg19 End | 95498387 |
| Hg38 Start | 96162683 |
| Hg38 End | 96162683 |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | CAST |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Epstein-Barr Virus |
| Virus Subtype Name | - |
| Virus Genome Accession | NC_007605.1 |
| TaxonomyID | 10376 |
| Virus Abbreviation | EBV |
| Virus Genome | Human gammaherpesvirus 4, complete genome |
| Virus Genome Length | 171823 bp |
| Virus Breakpoint1 | 43259 |
| Virus Breakpoint2 | - |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | 3300095 |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D