Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS42001363

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS42001363
Fusion NameEBV-WDFY4 integration
ValidatedNo
Curated WayViMIC
MethodWhole genome and RNA sequencing
Wet AssayYes
Sample IDP3T
Sample NameP3T
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameLung carcinoma
Disease Abbreviation-
CancerYes
Literature
PubMed ID33414372
JournalSignal Transduction and Targeted Therapy
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr10
Cytogenetic Bandq11.23
Human Strand
Human Integration Location Typeintronic
Hg19 Start50162826
Hg19 End50162826
Hg38 Start48954781
Hg38 End48954781
Junction Sequence-
Target Gene
Target GeneWDFY4
Nearby Gene-
Distance-
Virus Information
Virus NameEpstein-Barr Virus
Virus Subtype Name-
Virus Genome AccessionNC_007605.1
TaxonomyID10376
Virus AbbreviationEBV
Virus GenomeHuman gammaherpesvirus 4, complete genome
Virus Genome Length171823 bp
Virus Breakpoint158986
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID3300158