Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS42001436

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS42001436
Fusion NameEBV-chr8:26959866 integration
ValidatedNo
Curated WayViMIC
MethodWhole genome and RNA sequencing
Wet AssayYes
Sample IDP2T
Sample NameP2T
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameLung carcinoma
Disease Abbreviation-
CancerYes
Literature
PubMed ID33414372
JournalSignal Transduction and Targeted Therapy
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr8
Cytogenetic Bandp21.2
Human Strand
Human Integration Location Typeintergenic
Hg19 Start26817383
Hg19 End26817383
Hg38 Start26959866
Hg38 End26959866
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameEpstein-Barr Virus
Virus Subtype Name-
Virus Genome AccessionNC_007605.1
TaxonomyID10376
Virus AbbreviationEBV
Virus GenomeHuman gammaherpesvirus 4, complete genome
Virus Genome Length171823 bp
Virus Breakpoint137333
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID3300231