| Basic Information ▶ | |
| VISDB ID | TVIS43000131 |
|---|---|
| Fusion Name | MCV-SIL1 integration |
| Validated | No |
| Curated Way | ViMIC |
| Method | Deep sequencing with OncoPanel |
| Wet Assay | Yes |
| Sample ID | - |
| Sample Name | MCC014 |
| Sample Type | Tumor |
| Age | - |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Merkel cell carcinoma |
| Disease Abbreviation | MCC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 32188490 |
| Journal | Genome medicine |
| Published Year | 2020 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh37/hg19 |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr5 |
| Cytogenetic Band | q31.2 |
| Human Strand | |
| Human Integration Location Type | exonic |
| Hg19 Start | 138420218 |
| Hg19 End | 138511276 |
| Hg38 Start | 139084529 |
| Hg38 End | 139175587 |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | SIL1 |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Merkel cell polyomavirus |
| Virus Subtype Name | - |
| Virus Genome Accession | NC_010277.2 |
| TaxonomyID | 493803 |
| Virus Abbreviation | MCV |
| Virus Genome | Merkel cell polyomavirus isolate R17b, complete genome |
| Virus Genome Length | 5387 bp |
| Virus Breakpoint1 | - |
| Virus Breakpoint2 | - |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | 7300021 |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D