Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS44014100

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS44014100
Fusion NameHTLV-1-MBNL2 integration
ValidatedNo
Curated WayVISDB1.0
MethodHigh throughput sequenicng
Wet AssayNo
Sample IDATL190
Sample NameATL190
Sample TypeNontumor
Age-
Gender-
Disease Information
Disease NameAdult T-cell leukemia
Disease AbbreviationATL
CancerYes
Literature
PubMed ID24735963
JournalBlood
Published Year2014
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr13
Cytogenetic Bandq32.1
Human Strand-
Human Integration Location TypeIntronic
Hg19 Start97902401
Hg19 End97902401
Hg38 Start97250147
Hg38 End97250147
Junction Sequence-
Target Gene
Target GeneMBNL2
Nearby Gene-
Distance-
Virus Information
Virus NameHuman T-lymphotropic Virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID11908
Virus AbbreviationHTLV-1
Virus Genome-
Virus Genome Length9046
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-