Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS44025613

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS44025613
Fusion NameHTLV-1-KIAA0825 integration
ValidatedNo
Curated WayVISDB1.0
MethodHigh throughput sequenicng
Wet AssayNo
Sample IDHTLV-1 carrier#1
Sample NameHTLV-1 carrier#1
Sample TypeNontumor
Age-
Gender-
Disease Information
Disease NameNot given
Disease Abbreviation-
Cancer-
Literature
PubMed ID29186194
JournalPLOS Pathogens
Published Year2017
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr5
Cytogenetic Bandq15
Human Strand+
Human Integration Location TypeIntronic
Hg19 Start93506968
Hg19 End93506968
Hg38 Start94171263
Hg38 End94171263
Junction Sequence-
Target Gene
Target GeneENSG00000286577, KIAA0825
Nearby Gene-
Distance-
Virus Information
Virus NameHuman T-lymphotropic Virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID11908
Virus AbbreviationHTLV-1
Virus Genome-
Virus Genome Length9046
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-