Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS44031972

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS44031972
Fusion NameHTLV-1-MOV10L1 integration
ValidatedNo
Curated WayVISDB1.0
MethodHigh throughput sequenicng
Wet AssayNo
Sample ID-
Sample NameCo11
Sample TypeNontumor
Age49
Gender-
Disease Information
Disease NameNot given
Disease Abbreviation-
Cancer-
Literature
PubMed ID30307560
JournalThe Journal of Infectious Diseases
Published Year2019
Human Genome
Human Genome Version Descriptionhg18
Human Genome RefSeq AccessionGCF_000001405.12
Human Chromosomechr22
Cytogenetic Bandq13.33
Human Strand+
Human Integration Location TypeIntronic
Hg19 Start48874426
Hg19 End48874426
Hg38 Start50093870
Hg38 End50093870
Junction Sequence-
Target Gene
Target GeneENSG00000280395, MOV10L1
Nearby Gene-
Distance-
Virus Information
Virus NameHuman T-lymphotropic Virus
Virus Subtype NameHTLV-1c
Virus Genome AccessionKF242506
TaxonomyID11908
Virus AbbreviationHTLV-1
Virus GenomeHuman T-lymphotropic virus 1 strain Aus isolate Aus-CS, complete genome
Virus Genome Length9046
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-