| Basic Information ▶ | |
| VISDB ID | TVIS45000007 |
|---|---|
| Fusion Name | XMRV-chr4 integration |
| Validated | Yes |
| Curated Way | VISDB1.0 |
| Method | Linker ligation-mediated PCR (LM-PCR) |
| Wet Assay | Yes |
| Sample ID | - |
| Sample Name | C-7 |
| Sample Type | Cell line |
| Age | - |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Prostate cancer |
| Disease Abbreviation | PCa |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 20421928 |
| Journal | PLoS ONE |
| Published Year | 2010 |
| Human Genome ▶ | |
| Human Genome Version Description | hg18 |
| Human Genome RefSeq Accession | GCF_000001405.12 |
| Human Chromosome | chr4 |
| Cytogenetic Band | - |
| Human Strand | - |
| Human Integration Location Type | - |
| Hg19 Start | 109005770 |
| Hg19 End | - |
| Hg38 Start | 108084614 |
| Hg38 End | 108084614 |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | LEF1 |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Xenotropic murine leukemia virus-related virus |
| Virus Subtype Name | - |
| Virus Genome Accession | Not given |
| TaxonomyID | 438045 |
| Virus Abbreviation | XMRV |
| Virus Genome | - |
| Virus Genome Length | 8562 |
| Virus Breakpoint1 | - |
| Virus Breakpoint2 | - |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | - |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D