| Basic Information ▶ | |
| VISDB ID | TVIS45000040 |
|---|---|
| Fusion Name | MCV-KRT5 integration |
| Validated | No |
| Curated Way | ViMIC |
| Method | RNA sequencing |
| Wet Assay | Yes |
| Sample ID | - |
| Sample Name | BHY |
| Sample Type | Cell line |
| Age | - |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Oral squamous cell carcinoma |
| Disease Abbreviation | OSCC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 25485619 |
| Journal | Nature Biotechnology |
| Published Year | 2015 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh37/hg19 |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr12 |
| Cytogenetic Band | q13.13 |
| Human Strand | + |
| Human Integration Location Type | exonic |
| Hg19 Start | 52908391 |
| Hg19 End | 52914141 |
| Hg38 Start | 52514607 |
| Hg38 End | 52520357 |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | KRT5, ENSG00000303401, ENSG00000303382 |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Merkel cell polyomavirus |
| Virus Subtype Name | - |
| Virus Genome Accession | - |
| TaxonomyID | 493803 |
| Virus Abbreviation | MCV |
| Virus Genome | - |
| Virus Genome Length | - |
| Virus Breakpoint1 | 1467 |
| Virus Breakpoint2 | 2729 |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | 8100011 |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D