Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS50000023

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS50000023
Fusion NameMLV-IFT122 integration
ValidatedYes
Curated WayVISDB1.0
MethodSplinkerette-PCR
Wet AssayYes
Sample ID-
Sample Name19692354
Sample TypeCell line
Age-
Gender-
Disease Information
Disease NameNot given
Disease Abbreviation-
Cancer-
Literature
PubMed ID29517993
JournalViruses
Published Year2018
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr3
Cytogenetic Band-
Human Strand-
Human Integration Location Type-
Hg19 Start129169995
Hg19 End-
Hg38 Start129451152
Hg38 End129451152
Junction Sequence-
Target Gene
Target GeneIFT122
Nearby Gene-
Distance-
Virus Information
Virus NameMurine leukemia virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID11786
Virus AbbreviationMLV
Virus Genome-
Virus Genome Length8273
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-