Fusion event
HBV-chr4 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reference genome
AF090842.1;AB033554.1;AB014381.1;M32138.1;AB032431.1;AB036910.1;AB064310;AY090454.1
End
49315972/49313955 (Hg38)
Nearest miRNA
hsa-mir-12113/Upstream/1661212; hsa-mir-1243/Downstream/3398727;
Upstream sequence
acaacagcaaaactctgtctcaaaaaaaaaaaaaaaaaaaaagaagaagaaGAAGAAGAAGAATCCCCTCTCCGGAACCAGTCCTTTTGAAGGCCAGGGC
Downstream sequence
CAGAAAGATTATTCTCAACATAtgtgtgtcttctaattcaatggtgacgctatctaccgggacatagcattagattccaaagggccgagtcccgccagac
Zhao, L. H., et al.Genomic and oncogenic preference of HBV integration in hepatocellular carcinoma. Nat Commun ,2016,7: 12992.