Fusion event
HBV-chr12 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reference genome
AF090842.1;AB033554.1;AB014381.1;M32138.1;AB032431.1;AB036910.1;AB064310;AY090454.1
End
38443509/38049707 (Hg38)
Nearest miRNA
hsa-mir-1244-3/Upstream/12175628; hsa-let-7i/Downstream/4273993;
Upstream sequence
ggtgaaacctcctctctacaaaaatacaaacattagctggTTTCATAATCTGGACTCaaaattataaataaatagattaaaatttaaaataaaaCAATCT
Downstream sequence
TAAATGCTGTATTCTGTTATTTTTGCTTCCTACCCTGAGAAAAACATAATATAGCTGTtgtctgtctgtctgtccatctgtttgtgacagggtctcattc
Zhao, L. H., et al.Genomic and oncogenic preference of HBV integration in hepatocellular carcinoma. Nat Commun ,2016,7: 12992.