Fusion event
HBV-IGSF11 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reference genome
AF090842.1;AB033554.1;AB014381.1;M32138.1;AB032431.1;AB036910.1;AB064310;AY090454.1
End
118761453/119042606 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7g/Upstream/2192239; hsa-mir-12124/Downstream/1041958;
Upstream sequence
AGTTACAGCAACTGTTTCTCACCTGGATGACATTTTCAGCATTTGGCACTTGCTCAAAGAGTTGTCCAGAACCAACTGGGCCTGAGCTAGGAGCATAATG
Downstream sequence
gcagcaagccccgtccaagaaaagcctaagctcagacctgcctaacagtgcccacacctgatggtttttctctactcactctggtagctgaagacaaaag
Zhao, L. H., et al.Genomic and oncogenic preference of HBV integration in hepatocellular carcinoma. Nat Commun ,2016,7: 12992.