Fusion event
HBV-chr20 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reference genome
AF090842.1;AB033554.1;AB014381.1;M32138.1;AB032431.1;AB036910.1;AB064310;AY090454.1
End
38716725/40088084 (Hg38)
Nearest miRNA
hsa-mir-103a-2/Upstream/1571452; hsa-mir-1-1/Downstream/1080939;
Nearest cancer related gene
Upstream sequence
ATTCAAGTAATGCACTATTATATTATTTTGTAAAAATTCAAATATGTGGAATTTTCAGAGTCAAAAGTCAAATGTCTTTGACATCTTTGTCATTCCCTTT
Downstream sequence
ACCTACTCTCCTCATAGTCCCCTTCCTAGATTCAGGAATAACTAGTATCAATTTAGTGTGTATCCTCCCGTACCTTTTTCTACGTTTTTAGATACATAAA
Zhao, L. H., et al.Genomic and oncogenic preference of HBV integration in hepatocellular carcinoma. Nat Commun ,2016,7: 12992.